Robert Butera, Maeve L. McCarthy,
Analysis of real-time numerical
integration methods applied to dynamic clamp experiments, Journal of Neural
Engineering 1 (2004) pp. 187-194.
Real-time systems are frequently used as an
experimental tool, whereby simulated models interact in real time with neurophysiological experiments. The most demanding of these
techniques is known as the dynamic clamp, where simulated ion channel conductances are
artificially injected into a neuron via
intracellular electrodes for measurement and stimulation. Methodologies for
implementing the numerical integration of the gating variables in real time typically
employ first-order numerical methods, either Euler or exponential Euler (EE).
EE is often used for rapidly integrating ion channel gating variables. We find
via simulation studies that for small time steps, both methods are comparable,
but at larger time steps, EE performs worse than Euler. We derive error bounds
for both methods, and find that the error can be characterized in terms of two
ratios: time step over time constant, and voltage measurement error over the
slope factor of the steady-state activation curve of the voltage-dependent gating
variable. These ratios reliably bound the simulation error and yield results
consistent with the simulation analysis. Our bounds quantitatively illustrate
how measurement error restricts the accuracy that can be obtained by using
smaller step sizes. Finally, we demonstrate that Euler can be computed with
identical computational efficiency as EE.