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Copeland,
K. L., Pellock, S. J., Cox, J. R., Cafiero, M. L. and Tschumper,
G. S. “Examination of Tyrosine/Adenine Stacking Interactions in
Protein Complexes” J. Phys. Chem. B
2013,
117, 14001-14008.
Copeland, K. L., Anderson, J. A., Farley,
A. R., Cox, J. R., Tschumper, G. S. “Probing
Phenylalanine/Adenine pi-Stacking Interactions in Protein
Complexes with Explicitly Correlated and CCSD(T) Computations”
J. Phys. Chem. B, 2008, 112, 14291-14295.
Boehr, D. D., Farley, A. R., LaRonde, F., Murdock,
T. R., Wright, G. D. and Cox, J. R. “Establishing the Principles
of Recognition in the Adenine-Binding Region of an Aminoglycoside
Antibiotic Kinase (APH(3')-IIIa)”.
Biochemistry 2005, 44, 12445-12453.
Harper, S. A.,
Cox, J. R. and Wright, S. N. “Modeling of Benzocaine Analog
Interactions with the D4S6 Segment of Nav4.1 Voltage-Gated Sodium
Channels” Biophys. Chem. 2005, 113, 1-7.
Yeiser, A. J., Cox, J. R. and Wright, S. N.
“Voltage-Dependent Inhibition of Rat Skeleton Muscle Sodium
Channels by Aminoglycoside Antibiotics”. Eur. J. Physiol.
2004, 448, 204-213.
Whittemore, N.
A., Welch, K. T., Cox, J. R., Dougall, D. K. and Baker, D. C. “A
Quenched Molecular Dynamics-Rotating Frame Overhauser Spectroscopy
Study of a Series of Semi- biosynthetically Monoacylated
Anthocyanins” J. Org. Chem. 2004, 69, 1663-1669.
Carpenter, R. A., Farley, A. R., Cox, J. R.,
Dobson, A. J. and Whitlock, C. W. “Synthesis and Structural
Characterization of a Novel Tris-Indolyl Amine”
J. Under. Chem. Res. 2004, 1, 11-14.
Boehr, D. D., Farley, A. R., Wright, G. D. and Cox,
J. R. “Analysis of the π−π
Stacking Interactions Between the Aminoglycoside Antibiotic Kinase
APH(3')-IIIa and Its Nucleotide Ligands”. Chemistry & Biology
2002, 9, 1209-1217.
Johnston, T. C. and Cox, J. R. “Divergence of the
Proteins for Bacterial Bioluminescence Was Driven by GC Ratio
Requirements for Bacterial Genomes. In Bioluminescence and
Chemiluminescence 2000. Case, J. F., Herring, P. J., Robison,
B. H., Haddock, S. H. D., Kricka, L. J., and Stanley, P. E., Eds.;
World Scientific: London, 2001, 83-86.
Cox, J. R., Ekman, D. R., DiGiammarino, E. L., Akal‑Strader, A.,
and Serpersu, E. H. "Aminoglycoside Antibiotics Bound to
Aminoglycoside‑Detoxifying Enzymes and RNA Adopt Similar
Conformations" Cell Biochem. Biophys.
2000,
33, 297-308.
Serpersu, E. H., Cox, J. R., DiGiammarino, E. L.,
Mohler, M.L., Ekman, D. R., Akal‑Strader, A., and Owston, M.
"Conformations of Antibiotics in the Active Sites of
Aminoglycoside‑Detoxifying Enzymes" Cell Biochem. Biophys.
2000,
33, 309-321.
Mohler, M., Cox, J. R. and Serpersu, E. H.
“Aminoglycoside Phosphotransferase (3')-IIIa
(APH(3')-IIIa)-Bound
Conformation of the Aminoglycoside Lividomycin A Characterized by
NMR” Carbohydr. Lett.
1998,
3, 17-24.
Cox, J. R. and Serpersu, E. H. “Biologically
Important Conformations of Aminoglycoside Antibiotics Bound to an
Aminoglycoside 3'-Phosphotransferase
as Determined by Transferred Nuclear Overhauser Effect
Spectroscopy” Biochemistry
1997,
36,
2353-2359.
Cox, J. R., McKay, G. A., Wright, G. D., and
Serpersu, E. H. “Arrangement of Substrates at the Active Site of
An Aminoglycoside Antibiotic 3'-Phosphotransferase As Determined
by NMR” J. Am. Chem. Soc.
1996,
118,
1295-1301.
Cox, J. R. and Serpersu, E. H. “The Complete 1H
NMR Assignments of Aminoglycoside Antibiotics and Conformational
Studies of Butirosin A Through the Use of 2D NMR Spectroscopy”
Carbohydr. Res.
1995,
271,
55-63.
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Whittington, C., Pellock, S. J.,
Cunningham, R. and Cox, J. R. “Combining Content and Elements of
Communication into an Upper-Level Biochemistry Course”
Biochem. Mol. Biol. Educ. 2014, 42,
136-141.
Mittendorf, I. and Cox, J. R. “Around the
Beta-Turn: An Activity To Improve the Communication and Listening
Skills of Biochemistry Students”
J. Chem. Educ. 2013,
90, 1476-1478.
Cox,
J. R. and Yearwood, D. N. “In Defense of Teaching”
The Teaching Professor
2013, 27(1), page
4.
Jones,
B. W. and Cox, J. R. “External Representations in the Teaching and
Learning of Introductory Chemistry”
Creative Education 2011,
2(5), 461-465.
Cox, J.
R. “Lessons from Room 10” The Teaching Professor 2011,
25(5), page 6.
Cox, J. R.
“Enhancing Student Interactions with the Instructor and Content
Using Pen-Based Technology, YouTube Videos, and Virtual
Conferencing”. Biochem. Mol. Biol. Educ. 2011,
39, 4-9.
Derting, T. and Cox,
J. R. “Using a Tablet PC to Enhance Student Engagement and
Learning in an Introductory Organic Chemistry Course” J.
Chem. Educ. 2008, 85, 1638-1643.
Cox, J. R. “Is it Live or is it Professor
X” The Teaching Professor. 2008, 22(9), 2.
Rogers, J.
W. and Cox, J. R. “Integrating a Single Tablet PC in
Chemistry, Engineering and Physics Courses” J. Coll. Sci.
Teach. 2008, 37, 34-39.
Lyles, H., Robertson, B., Mangino, M. and Cox, J.
R. “Audio Podcasting in a Tablet PC-Enhanced Biochemistry
Course” Biochem. Mol. Biol. Educ. 2007, 35,
456-461.
Kohorst, K. and
Cox, J. R. “Virtual Office Hours Using a Tablet PC: E-lluminating
Biochemistry in an Online Environment” Biochem. Mol. Biol.
Educ. 2007, 35, 193-197.
Cox, J. R. “Developing an Alternate Assessment
Exercise for an Introductory Chemistry Course” The Teaching
Professor. 2006, 20(9), 5.
Cox, J. R. “Screen Capture on the Fly: Combining
Molecular Visualization and a Tablet PC in the Biochemistry
Classroom” Biochem. Mol. Biol. Educ. 2006, 34,
12-16.
Cox, J. R. and
Rogers, J. W. “Tablet PCs: Are They the Next Technopedagogical
Fad? J. Coll. Sci. Teach. 2005, 34(6), 7.
Cox, J. R. and Rogers, J. W. “Enter: The
(Well-Designed) Lecture” The Teaching Professor. 2005,
19(5), 1/6.
Cox, J. R. “Protein Data Bank Education Corner:
Using Visualization Tools”, Spring 2004 (No. 22), Protein
Data Bank Newsletter, p. 6-7 (Invited Article).
Keller, H. and Cox, J. R. “The Proteomics Stock
Market Project: A Cross-Disciplinary Collaboration in Biochemistry
and Business Education”. J. Chem. Educ. 2004,
81, 519-522.
Honey, D. W. and Cox J. R. “Lesson Plan for Protein
Exploration in a Large Biochemistry Class” Biochem. Mol. Biol.
Educ. 2003, 31, 356-362.
Cox, A. L. and Cox, J. R. “Determining
Oxidation-Reduction on a Simple Number Line”. J. Chem. Educ.
2002, 79, 965-967.
Canning, D. R. and Cox, J. R. “Teaching the
Structural Nature of Biological Molecules: Molecular Visualization
in the Classroom and in the Hands of Students” Chem. Educ. Res.
Prac.
2001,
2, 109-122. (Invited
Paper)
Peterson, R. R. and Cox, J. R. “Integrating
Computational Chemistry into a Project-Oriented Biochemistry
Laboratory Experience: A New Twist on the Lysozyme Experiment”
J. Chem. Educ.
2001,
78, 1551-1555.
Cox, J. R. “Teaching Noncovalent Interactions in
the Biochemistry Curriculum Through Molecular Visualization: The
Search for π
Interactions” J. Chem. Educ.
2000,
77, 1424-1428. (Cover Image)
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